miRBase entry: mml-mir-411

Stem-loop mml-mir-411


Accession
MI0007735
Description
Macaca mulatta mml-mir-411 precursor miRNA
Gene family
MIPF0000126; mir-379


Sequence

55852 reads, 399 reads per million, 9 experiments
ugguacuuggagagaUAGUAGACCGUAUAGCGUACGcuuuaucugugacgUAUGUAACACGGUCCACUAACccucaguauca
(((((((..(((.(.((((.((((((...((((((((.........).)))))))...)))))).)))).).))))))))))

Structure
       ug   a a    A      AUA       - uuu 
ugguacu  gag g UAGU GACCGU   GCGUACG c   a
|||||||  ||| | |||| ||||||   ||||||| |   u
acuauga  cuc C AUCA CUGGCA   UGUAUgc g   c
       --   c A    C      CAA       a ugu 


Annotation confidence Not enough data
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Genome context
chr7: 163358629-163358710 [+]
Clustered miRNAs
10 other miRNAs are < 10 kb from mml-mir-411
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-411-5p

Accession MIMAT0006317
Description Macaca mulatta mml-miR-411-5p mature miRNA
Sequence 16 - UAGUAGACCGUAUAGCGUACG - 36
Evidence experimental
Illumina [2]
Database links
Predicted targets

Mature mml-miR-411-3p

Accession MIMAT0026870
Description Macaca mulatta mml-miR-411-3p mature miRNA
Sequence 51 - UAUGUAACACGGUCCACUAAC - 71
Evidence experimental
Illumina [2]
Database links
Predicted targets

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45