miRBase entry: mml-mir-409

Stem-loop mml-mir-409


Accession
MI0007733
Description
Macaca mulatta mml-mir-409 precursor miRNA
Gene family
MIPF0000018; mir-154

Literature search
1 open access papers mention mml-mir-409
(2 sentences)

Sequence

10138 reads, 83 reads per million, 9 experiments
ugguacucggggagAGGUUACCCGAGCAACUUUGCAUcuggacgacGAAUGUUGCUCGGUGAACCCCUuuucgguauca
((((((.(((((((.((((..((((((((((((((........).)))).)))))))))..)))).)))))))))))))

Structure
      u       A    AC         -    - AUc 
ugguac cggggag GGUU  CCGAGCAAC UUUG C   u
|||||| ||||||| ||||  ||||||||| |||| |    
acuaug gcuuuUC CCAA  GGCUCGUUG AAGc g   g
      -       C    GU         U    a cag 


Annotation confidence High
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Genome context
chr7: 163399096-163399174 [+]
Clustered miRNAs
11 other miRNAs are < 10 kb from mml-mir-409
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-409-5p

Accession MIMAT0006314
Description Macaca mulatta mml-miR-409-5p mature miRNA
Sequence 15 - AGGUUACCCGAGCAACUUUGCAU - 37
Evidence not_experimental
Database links
Predicted targets

Mature mml-miR-409-3p

Accession MIMAT0006315
Description Macaca mulatta mml-miR-409-3p mature miRNA
Sequence 47 - GAAUGUUGCUCGGUGAACCCCU - 68
Evidence not_experimental
Database links
Predicted targets

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8