Stem-loop mml-mir-381

Accession

MI0007729

Description

Macaca mulatta mml-mir-381 precursor miRNA

Gene family

MIPF0000018; mir-154

Literature search

1 open access papers mention mml-mir-381
(2 sentences)

Sequence

68521 reads, 447 reads per million, 9 experiments

uacuuaaAGCGAGGUUGCCCUUUGUAUAUUcgguuuauugacauggaaUAUACAAGGGCAAGCUCUCUGUgagua
((((((.((.(((.((((((((.((((((((.((........)).)))))))))))))))).))).)).))))))

Structure

      a  C   G        U        g  uua 
uacuua AG GAG UUGCCCUU GUAUAUUc gu   u
|||||| || ||| |||||||| |||||||| ||    
augagU UC CUC AACGGGAA CAUAUaag ua   u
      G  U   G        -        g  cag 

Annotation confidence High

Genome context

chr7: 163379925-163379999 [+]

Clustered miRNAs

16 other miRNAs are < 10 kb from mml-mir-381

Mature mml-miR-381-3p

• Accession: MIMAT0006310
• Description: Macaca mulatta mml-miR-381-3p mature miRNA
• Sequence: 49 - UAUACAAGGGCAAGCUCUCUGU - 70
• Evidence: experimental ; Illumina [2]

Mature mml-miR-381-5p

• Accession: MIMAT0026867
• Description: Macaca mulatta mml-miR-381-5p mature miRNA
• Sequence: 8 - AGCGAGGUUGCCCUUUGUAUAUU - 30
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45