miRBase entry: mml-mir-379

Stem-loop mml-mir-379


Accession
MI0007727
Description
Macaca mulatta mml-mir-379 precursor miRNA
Gene family
MIPF0000126; mir-379

Literature search
1 open access papers mention mml-mir-379
(1 sentences)

Sequence

240410 reads, 1659 reads per million, 9 experiments
agagaUGGUAGACUAUGGAACGUAGGcguuaugauuuuugaccUAUGUAACAUGGUCCACUAACucu
((((.((((.(((((((..(((((((((..........)).)))))))..))))))).)))).))))

Structure
    a    A       GA       -  uuau 
agag UGGU GACUAUG  ACGUAGG cg    g
|||| |||| |||||||  ||||||| ||     
ucuC AUCA CUGGUAC  UGUAUcc gu    a
    A    C       AA       a  uuuu 


Annotation confidence High
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Genome context
chr7: 163357370-163357436 [+]
Clustered miRNAs
9 other miRNAs are < 10 kb from mml-mir-379
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-379-5p

Accession MIMAT0006308
Description Macaca mulatta mml-miR-379-5p mature miRNA
Sequence 6 - UGGUAGACUAUGGAACGUAGG - 26
Evidence experimental
Illumina [2]
Database links
Predicted targets

Mature mml-miR-379-3p

Accession MIMAT0026865
Description Macaca mulatta mml-miR-379-3p mature miRNA
Sequence 44 - UAUGUAACAUGGUCCACUAAC - 64
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45