miRBase entry: mml-mir-222

Stem-loop mml-mir-222


Accession
MI0007680
Description
Macaca mulatta mml-mir-222 precursor miRNA
Gene family
MIPF0000051; mir-221

Literature search
1 open access papers mention mml-mir-222
(1 sentences)

Sequence

10248 reads, 73 reads per million, 9 experiments
gcugcuggaagguauagguacccucaauggcuCAGUAGCCAGUGUAGAUCCugucuuucguaaucagcAGCUACAUCUGGCUACUGGGUcucugauggcaucuucuagcu
...((((((((((.......((.(((..(((((((((((((((((((...(((...........)))...))))).))))))))))))))..))).)).)))))))))).

Structure
gcu          auaggua  c   au              -     AUC   ucuu 
   gcuggaaggu       cc uca  ggcuCAGUAGCCAG UGUAG   Cug    u
   ||||||||||       || |||  |||||||||||||| |||||   |||    c
   cgaucuucua       gg agu  cUGGGUCAUCGGUC ACAUC   gac    g
--u          ------c  u   cu              U     GAc   uaau 


Annotation confidence High
Do you think this miRNA is real?

Genome context
chrX: 45880323-45880432 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mml-mir-222
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-222-3p

Accession MIMAT0006250
Description Macaca mulatta mml-miR-222-3p mature miRNA
Sequence 69 - AGCUACAUCUGGCUACUGGGU - 89
Evidence experimental
Illumina [2]
Database links
Predicted targets

Mature mml-miR-222-5p

Accession MIMAT0026849
Description Macaca mulatta mml-miR-222-5p mature miRNA
Sequence 33 - CAGUAGCCAGUGUAGAUCC - 51
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45