Stem-loop mml-mir-196a-2

Accession

MI0007659

Description

Macaca mulatta mml-mir-196a-2 precursor miRNA

Gene family

MIPF0000031; mir-196

Literature search

1 open access papers mention mml-mir-196a-2
(1 sentences)

Sequence

67231 reads, 490 reads per million, 9 experiments

ugcucgcucagcugaucuguggcuUAGGUAGUUUCAUGUUGUUGGgauugaguuuugaacucGGCAACAAGAAACUGCCUGAGuuacaucagucgguuuucgucgagggc
..(((((..(((((((.((((((((((((((((((.((((((((((.((........)))))))))))).))))))))))))))))))...)))))))...).))))...

Structure

-ug    - -uc       --c                  A          a  gag 
   cucg c   agcugau   uguggcuUAGGUAGUUUC UGUUGUUGGg uu   u
   |||| |   |||||||   |||||||||||||||||| |||||||||| ||    
   gagc g   uuggcug   acauuGAGUCCGUCAAAG ACAACGGcuc aa   u
cgg    u cuu       acu                  A          -  guu 

Annotation confidence High

Genome context

chr11: 52660840-52660949 [+]

Mature mml-miR-196a-5p

• Accession: MIMAT0002519
• Description: Macaca mulatta mml-miR-196a-5p mature miRNA
• Sequence: 25 - UAGGUAGUUUCAUGUUGUUGG - 45
• Evidence: experimental ; Illumina [2]

Mature mml-miR-196a-3p

• Accession: MIMAT0026839
• Description: Macaca mulatta mml-miR-196a-3p mature miRNA
• Sequence: 63 - GGCAACAAGAAACUGCCUGAG - 83
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45