miRBase entry: mml-mir-195

Stem-loop mml-mir-195


Accession
MI0007658
Description
Macaca mulatta mml-mir-195 precursor miRNA
Gene family
MIPF0000006; mir-15

Literature search
1 open access papers mention mml-mir-195
(1 sentences)

Sequence

32910 reads, 245 reads per million, 9 experiments
agcuucccuggcucUAGCAGCACAGAAAUAUUGGCacagggaagcaagucugCCAAUAUUGGCUGUGCUGCUCCAggcaggguggug
.(((.(((((.((..((((((((((.((((((((((..((........))))))))))))..))))))))))..)).))))).))).

Structure
a   u     g  cU          -A          ca  gaa 
 gcu cccug cu  AGCAGCACAG  AAUAUUGGCa  gg   g
 ||| ||||| ||  ||||||||||  ||||||||||  ||    
 ugg gggac gA  UCGUCGUGUC  UUAUAACCgu  cu   c
g   u     g  CC          GG          --  gaa 


Annotation confidence High
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Genome context
chr16: 6978210-6978296 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mml-mir-195
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-195-5p

Accession MIMAT0006228
Description Macaca mulatta mml-miR-195-5p mature miRNA
Sequence 15 - UAGCAGCACAGAAAUAUUGGC - 35
Evidence experimental
Illumina [2]
Database links
Predicted targets

Mature mml-miR-195-3p

Accession MIMAT0026838
Description Macaca mulatta mml-miR-195-3p mature miRNA
Sequence 53 - CCAAUAUUGGCUGUGCUGCUCCA - 75
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45