miRBase entry: mml-mir-99b

Stem-loop mml-mir-99b


Accession
MI0007609
Description
Macaca mulatta mml-mir-99b precursor miRNA
Gene family
MIPF0000033; mir-10

Literature search
2 open access papers mention mml-mir-99b
(4 sentences)

Sequence

1438241 reads, 11786 reads per million, 9 experiments
ggcaccCACCCGUAGAACCGACCUUGCGgggccuucgccgcacacAAGCUCGUGUCUGUGGGUCCGuguc
(((((..(((((((((..(((.((((.(.(((....))).)...)))).)))..)))))))))..)))))

Structure
     cC         AC   C    --C g   c 
ggcac  ACCCGUAGA  CGA CUUG   G ggc u
|||||  |||||||||  ||| ||||   | |||  
cuguG  UGGGUGUCU  GCU GAAc   c ccg u
     CC         GU   C    aca g   c 


Annotation confidence High
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Genome context
chr19: 46927837-46927906 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from mml-mir-99b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-99b-5p

Accession MIMAT0006179
Description Macaca mulatta mml-miR-99b-5p mature miRNA
Sequence 7 - CACCCGUAGAACCGACCUUGCG - 28
Evidence experimental
Illumina [2]
Database links
Predicted targets

Mature mml-miR-99b-3p

Accession MIMAT0026812
Description Macaca mulatta mml-miR-99b-3p mature miRNA
Sequence 46 - AAGCUCGUGUCUGUGGGUCCG - 66
Evidence experimental
Illumina [2]
Database links
Predicted targets

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45