Stem-loop mml-mir-30d

Accession

MI0007601

Description

Macaca mulatta mml-mir-30d precursor miRNA

Gene family

MIPF0000005; mir-30

Literature search

2 open access papers mention mml-mir-30d
(5 sentences)

Sequence

2097427 reads, 13514 reads per million, 9 experiments

uuguUGUAAACAUCCCCGACUGGAAGcuguaagacacagcuaagcUUUCAGUCAGAUGUUUGCUGCuac
..((.(((((((((...(((((((((((..............))))))))))).))))))))).))...

Structure

-uu  U         CCC           guaaga 
   gu GUAAACAUC   GACUGGAAGcu      c
   || |||||||||   |||||||||||       
   CG CGUUUGUAG   CUGACUUUcga      a
cau  U         --A           aucgac 

Annotation confidence High

Genome context

chr8: 134099791-134099859 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mml-mir-30d

Mature mml-miR-30d-5p

• Accession: MIMAT0006171
• Description: Macaca mulatta mml-miR-30d-5p mature miRNA
• Sequence: 5 - UGUAAACAUCCCCGACUGGAAG - 26
• Evidence: experimental ; Illumina [2]

Mature mml-miR-30d-3p

• Accession: MIMAT0026806
• Description: Macaca mulatta mml-miR-30d-3p mature miRNA
• Sequence: 46 - UUUCAGUCAGAUGUUUGCUGC - 66
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45