miRBase entry: mml-mir-29b-1

Stem-loop mml-mir-29b-1


Accession
MI0007596
Description
Macaca mulatta mml-mir-29b-1 precursor miRNA
Gene family
MIPF0000009; mir-29

Literature search
5 open access papers mention mml-mir-29b-1
(12 sentences)

Sequence

57984 reads, 371 reads per million, 9 experiments
cuucaggaAGCUGGUUUCAUAUGGUGGUUUAGAuuuaaauagugauugucUAGCACCAUUUGAAAUCAGUGUUcuuggggg
(((((((((((((((((((.((((((..((((((.............)))))))))))).)))))))))).))))))))).

Structure
-         -          U      GU      uuaaa 
 cuucaggaA GCUGGUUUCA AUGGUG  UUAGAu     u
 ||||||||| |||||||||| ||||||  ||||||     a
 gggguucUU UGACUAAAGU UACCAC  GAUcug     g
g         G          U      --      uuagu 


Annotation confidence High
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Genome context
chr3: 157003735-157003815 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mml-mir-29b-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-29b-3p

Accession MIMAT0006168
Description Macaca mulatta mml-miR-29b-3p mature miRNA
Sequence 51 - UAGCACCAUUUGAAAUCAGUGUU - 73
Evidence experimental
Illumina [2]
Database links
Predicted targets

Mature mml-miR-29b-1-5p

Accession MIMAT0026803
Description Macaca mulatta mml-miR-29b-1-5p mature miRNA
Sequence 9 - AGCUGGUUUCAUAUGGUGGUUUAGA - 33
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45