Stem-loop mml-mir-23b

Accession

MI0007592

Description

Macaca mulatta mml-mir-23b precursor miRNA

Gene family

MIPF0000027; mir-23

Literature search

3 open access papers mention mml-mir-23b
(3 sentences)

Sequence

86240 reads, 568 reads per million, 9 experiments

cucaggugcucuggcugcuuGGGUUCCUGGCAUGCUGAUUUgugacuuaagauuaaaAUCACAUUGCCAGGGAUUACCacgcaaccacgaccuuggc
.(((((.(.(((((.(((.(((((((((((((((.((((((..............)))))))).))))))))))..))).))).))).)))))))).

Structure

c     u c  -   c   u   --          -  C      gugacu 
 ucagg g uc ugg ugc uGG  GUUCCUGGCA UG UGAUUU      u
 ||||| | || ||| ||| |||  |||||||||| || ||||||       
 gguuc c ag acc acg aCC  UAGGGACCGU AC ACUAaa      a
c     - -  c   a   c   AU          U  -      auuaga 

Annotation confidence High

Genome context

chr15: 108904067-108904163 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from mml-mir-23b

Mature mml-miR-23b-3p

• Accession: MIMAT0006165
• Description: Macaca mulatta mml-miR-23b-3p mature miRNA
• Sequence: 58 - AUCACAUUGCCAGGGAUUACC - 78
• Evidence: experimental ; Illumina [2]

Mature mml-miR-23b-5p

• Accession: MIMAT0026800
• Description: Macaca mulatta mml-miR-23b-5p mature miRNA
• Sequence: 21 - GGGUUCCUGGCAUGCUGAUUU - 41
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45