miRBase entry: mml-mir-20b

Stem-loop mml-mir-20b


Accession
MI0007591
Description
Macaca mulatta mml-mir-20b precursor miRNA
Gene family
MIPF0000001; mir-17

Literature search
2 open access papers mention mml-mir-20b
(5 sentences)

Sequence

3799 reads, 29 reads per million, 9 experiments
aguacCAAAGUGCUCAUAGUGCAGGUAGuuuuggcaugacucUACUGUAGUGUGGGCACUUCCAGuacu
(((((..(((((((((((.(((((..((((.......))))...))))).)))))))))))...)))))

Structure
     -CA           G     -GU    uu 
aguac   AAGUGCUCAUA UGCAG   AGuu  g
|||||   ||||||||||| |||||   ||||  g
ucauG   UUCACGGGUGU AUGUC   ucag  c
     ACC           G     AUc    ua 


Annotation confidence Not enough data
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Genome context
chrX: 128132164-128132232 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from mml-mir-20b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-20b-5p

Accession MIMAT0006164
Description Macaca mulatta mml-miR-20b-5p mature miRNA
Sequence 6 - CAAAGUGCUCAUAGUGCAGGUAG - 28
Evidence experimental
Illumina [2]

Mature mml-miR-20b-3p

Accession MIMAT0026799
Description Macaca mulatta mml-miR-20b-3p mature miRNA
Sequence 43 - UACUGUAGUGUGGGCACUUCCAG - 65
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45