Stem-loop mml-mir-9-3

Accession

MI0007586

Description

Macaca mulatta mml-mir-9-3 precursor miRNA

Gene family

MIPF0000014; mir-9

Literature search

2 open access papers mention mml-mir-9-3
(2 sentences)

Sequence

5879249 reads, 33350 reads per million, 9 experiments

ggaggcccguuucucUCUUUGGUUAUCUAGCUGUAUGAgugccacagagccgucAUAAAGCUAGAUAACCGAAAGUagaaaugacucuca
.((((..(((((((((.(((((((((((((((.(((((..((......))..))))).))))))))))))))))).)))))))..)))).

Structure

g    cc       -  C               G     gu  ca 
 gagg  cguuucu cU UUUGGUUAUCUAGCU UAUGA  gc  c
 ||||  ||||||| || ||||||||||||||| |||||  ||   
 cucu  guaaaga GA AAGCCAAUAGAUCGA AUAcu  cg  a
a    ca       U  -               A     gc  ag 

Annotation confidence High

Genome context

chr7: 67381821-67381910 [+]

Mature mml-miR-9-5p

• Accession: MIMAT0006160
• Description: Macaca mulatta mml-miR-9-5p mature miRNA
• Sequence: 16 - UCUUUGGUUAUCUAGCUGUAUGA - 38
• Evidence: experimental ; Illumina [2]

Mature mml-miR-9-3-3p

• Accession: MIMAT0031078
• Description: Macaca mulatta mml-miR-9-3-3p mature miRNA
• Sequence: 55 - AUAAAGCUAGAUAACCGAAAGU - 76
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45