miRBase entry: mml-let-7i

Stem-loop mml-let-7i


Accession
MI0007580
Description
Macaca mulatta mml-let-7i precursor miRNA
Gene family
MIPF0000002; let-7

Literature search
4 open access papers mention mml-let-7i
(7 sentences)

Sequence

105334 reads, 748 reads per million, 9 experiments
cuggcUGAGGUAGUAGUUUGUGCUGUUggucggguugugacauugcccgcuguggagauaacUGCGCAAGCUACUGCCUUGCUag
(((((.(((((((((((((((((.(((((.(((((.........)))))))........))).))))))))))))))))))))))

Structure
     U                 U   --------  u     ugu 
cuggc GAGGUAGUAGUUUGUGC GUU        gg cgggu   g
||||| ||||||||||||||||| |||        || |||||   a
gaUCG UUCCGUCAUCGAACGCG caa        uc gcccg   c
     -                 U   uagaggug  -     uua 


Annotation confidence High
Do you think this miRNA is real?

Genome context
chr11: 61524606-61524690 [+]

Database links

Mature mml-let-7i-5p

Accession MIMAT0006158
Description Macaca mulatta mml-let-7i-5p mature miRNA
Sequence 6 - UGAGGUAGUAGUUUGUGCUGUU - 27
Evidence experimental
Illumina [2]
Database links
Predicted targets

Mature mml-let-7i-3p

Accession MIMAT0026795
Description Macaca mulatta mml-let-7i-3p mature miRNA
Sequence 63 - UGCGCAAGCUACUGCCUUGCU - 83
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45