miRBase entry: mml-let-7d

Stem-loop mml-let-7d


Accession
MI0007575
Description
Macaca mulatta mml-let-7d precursor miRNA
Gene family
MIPF0000002; let-7

Literature search
4 open access papers mention mml-let-7d
(7 sentences)

Sequence

207581 reads, 1351 reads per million, 9 experiments
ccuaggaAGAGGUAGUAGGUUGCAUAGUUuuagggcagggauuuugcccacaaggagguaacuauacgaccugcugccuuucuuagg
(((((((.((((((((((((((.((((((...((((((.....))))))..........)))))).)))))))))))))))))))))

Structure
       A              C      -------uua      g 
ccuagga GAGGUAGUAGGUUG AUAGUU          gggcag g
||||||| |||||||||||||| ||||||          |||||| a
ggauucu uuccgucguccagc uaucaa          cccguu u
       -              a      uggaggaaca      u 


Annotation confidence High
Do you think this miRNA is real?

Genome context
chr15: 44325586-44325672 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from mml-let-7d
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-let-7d

Accession MIMAT0006154
Description Macaca mulatta mml-let-7d mature miRNA
Sequence 8 - AGAGGUAGUAGGUUGCAUAGUU - 29
Evidence not_experimental
Database links
Predicted targets

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8