miRBase entry: mml-let-7c

Stem-loop mml-let-7c


Accession
MI0007574
Description
Macaca mulatta mml-let-7c precursor miRNA
Gene family
MIPF0000002; let-7

Literature search
4 open access papers mention mml-let-7c
(7 sentences)

Sequence

1712417 reads, 13938 reads per million, 9 experiments
gcauccggguUGAGGUAGUAGGUUGUAUGGUUuagaguuacacccugggaguuaaCUGUACAACCUUCUAGCUUUCCuuggagc
((.((((((..(((.(((.(((((((((((((..((.(..((...))..).))))))))))))))).))).)))..))))))))

Structure
  a      uU   G   U             ua  g ua  c 
gc uccggg  GAG UAG AGGUUGUAUGGUU  ga u  ca  
|| ||||||  ||| ||| |||||||||||||  || |  || c
cg agguuC  UUC AUC UCCAACAUGUCaa  uu a  gu  
  -      CU   G   U             --  g gg  c 


Annotation confidence High
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Genome context
chr3: 31070403-31070486 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mml-let-7c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-let-7c-5p

Accession MIMAT0006153
Description Macaca mulatta mml-let-7c-5p mature miRNA
Sequence 11 - UGAGGUAGUAGGUUGUAUGGUU - 32
Evidence experimental
Illumina [2]
Database links
Predicted targets

Mature mml-let-7c-3p

Accession MIMAT0026791
Description Macaca mulatta mml-let-7c-3p mature miRNA
Sequence 56 - CUGUACAACCUUCUAGCUUUCC - 77
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45