miRBase entry: mml-let-7a-3

Stem-loop mml-let-7a-3


Accession
MI0007572
Description
Macaca mulatta mml-let-7a-3 precursor miRNA
Gene family
MIPF0000002; let-7

Literature search
6 open access papers mention mml-let-7a-3
(11 sentences)

Sequence

7971388 reads, 56632 reads per million, 9 experiments
gggUGAGGUAGUAGGUUGUAUAGUUuggggcucugcccugcuaugggauaaCUAUACAAUCUACUGUCUUUCCu
(((.(((((((((((((((((((((((((((...)))))).........))))))))))))))))))))).)))

Structure
   U                     ---------      u 
ggg GAGGUAGUAGGUUGUAUAGUU         uggggc  
||| |||||||||||||||||||||         |||||| c
uCC UUCUGUCAUCUAACAUAUCaa         gucccg  
   U                     uaggguauc      u 


Annotation confidence High
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Genome context
chr10: 88293991-88294064 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mml-let-7a-3
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-let-7a-5p

Accession MIMAT0006151
Description Macaca mulatta mml-let-7a-5p mature miRNA
Sequence 4 - UGAGGUAGUAGGUUGUAUAGUU - 25
Evidence experimental
Illumina [2]
Database links
Predicted targets

Mature mml-let-7a-3p

Accession MIMAT0026789
Description Macaca mulatta mml-let-7a-3p mature miRNA
Sequence 52 - CUAUACAAUCUACUGUCUUUCC - 73
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45