miRBase entry: mml-let-7a-1

Stem-loop mml-let-7a-1


Accession
MI0007570
Description
Macaca mulatta mml-let-7a-1 precursor miRNA
Gene family
MIPF0000002; let-7

Literature search
6 open access papers mention mml-let-7a-1
(11 sentences)

Sequence

7883280 reads, 56047 reads per million, 9 experiments
ugggaUGAGGUAGUAGGUUGUAUAGUUuuagggucacacccaccacugggagauaacuauacaaucuacugucuuuccua
(((((.(((((((((((((((((((((.....(((...((((....)))).)))))))))))))))))))))))))))))

Structure
     U                     uuagg   aca    c 
uggga GAGGUAGUAGGUUGUAUAGUU     guc   ccca c
||||| |||||||||||||||||||||     |||   ||||  
auccu uucugucaucuaacauaucaa     uag   gggu a
     -                     -----   --a    c 


Annotation confidence High
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Genome context
chr15: 44322723-44322802 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from mml-let-7a-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-let-7a-5p

Accession MIMAT0006151
Description Macaca mulatta mml-let-7a-5p mature miRNA
Sequence 6 - UGAGGUAGUAGGUUGUAUAGUU - 27
Evidence experimental
Illumina [2]
Database links
Predicted targets

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8