Stem-loop sequence gga-mir-130c

AccessionMI0007560 (change log)
DescriptionGallus gallus miR-130c stem-loop
Gene family MIPF0000034; mir-130
Literature search

4 open access papers mention gga-mir-130c
(6 sentences)

Stem-loop 
   uuga   g  u   u    c        u          a  -a   au 
5'     gcg ug cug ccag gcccuuuu auguuguacu cu  gug  c
       ||| || ||| |||| |||||||| |||||||||| ||  |||   
3'     cgu ac gac gguu cgggaaaa uguaacguga ga  cac  a
   ----   g  -   c    a        u          c  aa   au
Get sequence
Deep sequencing
54650 reads, 580 reads per million, 5 experiments
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (Gallus_gallus-5.0; GCA_000002315.3) Overlapping transcripts
chr19: 7202980-7203073 [-]
sense
ENSGALT00000034804 ; SKA2-201; intron 1
Clustered miRNAs
< 10kb from gga-mir-130c
gga-mir-130cchr19: 7202980-7203073 [-]
gga-mir-301bchr19: 7202692-7202781 [-]
Database links

Mature sequence gga-miR-130c-5p

Accession MIMAT0007733
Previous IDsgga-miR-130c*
Sequence

21 -  

gcccuuuuuauguuguacuacu

 - 42

Get sequence
Deep sequencing279 reads, 5 experiments
Evidence experimental; Illumina [1]
Predicted targets

Mature sequence gga-miR-130c-3p

Accession MIMAT0007734
Previous IDsgga-miR-130c
Sequence

60 -  

cagugcaauguuaaaagggcau

 - 81

Get sequence
Deep sequencing54115 reads, 5 experiments
Evidence experimental; Illumina [1], cloned [2], Northern [2]
Database links
Predicted targets

References

1
PMID:18469162 "A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach" Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML Genome Res. 18:957-964(2008).
2
PMID:18511220 "Identification of novel chicken microRNAs and analysis of their genomic organization" Shao P, Zhou H, Xiao ZD, He JH, Huang MB, Chen YQ, Qu LH Gene. 418:34-40(2008).