Stem-loop gga-mir-1805

Accession

MI0007550

Description

Gallus gallus gga-mir-1805 precursor miRNA

Gene family

MIPF0000947; mir-1805

Literature search

1 open access papers mention gga-mir-1805
(1 sentences)

Sequence

8613 reads, 113 reads per million, 5 experiments

ggaauauucuggGAGUUGUAGUCUUUCAAACAGAgcuuugcaaggacauaccUGUAUUGGAACACUACAGCUCccugaacuucc
((((..(((.((((((((((((.((((((((((..................)))).)))))).)))))))))))).))).))))

Structure

    ua   u            C      -    Agcuuugc 
ggaa  uuc ggGAGUUGUAGU UUUCAA ACAG        a
||||  ||| |||||||||||| |||||| ||||         
ccuu  aag ccCUCGACAUCA AAGGUU UGUc        a
    -c   u            C      A    cauacagg 

Annotation confidence High

Genome context

chr1: 131070174-131070257 [-]

Mature gga-miR-1805-5p

• Accession: MIMAT0007722
• Description: Gallus gallus gga-miR-1805-5p mature miRNA
• Sequence: 13 - GAGUUGUAGUCUUUCAAACAGA - 34
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1805-3p

• Accession: MIMAT0007723
• Description: Gallus gallus gga-miR-1805-3p mature miRNA
• Sequence: 53 - UGUAUUGGAACACUACAGCUC - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964