miRBase entry: gga-mir-1784

Stem-loop gga-mir-1784


Accession
MI0007527
Description
Gallus gallus gga-mir-1784 precursor miRNA
Gene family
MIPF0001873; mir-1784


Sequence

299 reads, 7 reads per million, 4 experiments
uggaccaauuucuuggggcccaaUUCUGCUCUUAUUGAAAUCAGUgagaguucugccauugacuuaaauaggagcagaauugggaccuaagaagagauuucca
((((....(((((((((.((((((((((((((((((....((((((..........))))))....)))))))))))))))))).))))))))).....))))

Structure
    -ccaa         g                  GAAA      agag 
ugga     uuucuuggg cccaaUUCUGCUCUUAUU    UCAGUg    u
||||     ||||||||| ||||||||||||||||||    ||||||     
accu     gaagaaucc ggguuaagacgaggauaa    aguuac    u
    uuaga         a                  auuc      cguc 


Annotation confidence Not enough data
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Genome context
chr3: 35737908-35738010 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from gga-mir-1784
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gga-miR-1784-5p

Accession MIMAT0007696
Description Gallus gallus gga-miR-1784-5p mature miRNA
Sequence 24 - UUCUGCUCUUAUUGAAAUCAGU - 45
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964