miRBase entry: gga-mir-1780

Stem-loop gga-mir-1780


Accession
MI0007523
Description
Gallus gallus gga-mir-1780 precursor miRNA


Sequence

agucagggcuggggagcagcaguaacagcagcugcugguucugccUCUGCGACUGCAUCUCCACUCcucuguugcu
((((((((.(((((((((((((...((((....))))...)))).........))).))))))...)))))..)))

Structure
   --     --c      -   ---------    uaa    a 
agu  caggg   ugggga gca         gcag   cagc g
|||  |||||   |||||| |||         ||||   ||||  
ucg  gucuc   ACCUCU CGU         cguc   gucg c
   uu     CUC      A   CAGCGUCUc    uug    u 


Annotation confidence Not enough data
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Genome context
chr23: 5087392-5087467 [-]

Database links

Mature gga-miR-1780

Accession MIMAT0007691
Description Gallus gallus gga-miR-1780 mature miRNA
Sequence 46 - UCUGCGACUGCAUCUCCACUC - 66
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964