miRBase entry: gga-mir-1749

Stem-loop gga-mir-1749


Accession
MI0007489
Description
Gallus gallus gga-mir-1749 precursor miRNA

Literature search
1 open access papers mention gga-mir-1749
(4 sentences)

Sequence

2 reads, 1 reads per million, 2 experiments
gagugcagcuggagggcuacagggAGAUAAGGAACUGAACUGGCUgcaucucugcugcUUGGCUCUGUUCCCUAUUUCCcgucuccuuagcaaaucuc
(((....((((.((((..((.((((((((.(((((.((.(.(((.(((....))).))).)..)).))))).)))))))))).))))))))....)))

Structure
   ugca    g    cu  a        A     U  -A U   U   u 
gag    gcug aggg  ac gggAGAUA GGAAC GA  C GGC gca c
|||    |||| ||||  || |||||||| ||||| ||  | ||| |||  
cuc    cgau uccu  ug cCCUUUAU CCUUG CU  G Ucg cgu u
   uaaa    -    -c  -        C     U  CG U   u   c 


Annotation confidence Not enough data
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Genome context
chr2: 573269-573366 [+]

Database links

Mature gga-miR-1749-5p

Accession MIMAT0007654
Description Gallus gallus gga-miR-1749-5p mature miRNA
Sequence 25 - AGAUAAGGAACUGAACUGGCU - 45
Evidence experimental
Illumina [1]

Mature gga-miR-1749-3p

Accession MIMAT0007655
Description Gallus gallus gga-miR-1749-3p mature miRNA
Sequence 59 - UUGGCUCUGUUCCCUAUUUCC - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964