miRBase entry: gga-mir-1732-1

Stem-loop gga-mir-1732-1


Accession
MI0007471
Description
Gallus gallus gga-mir-1732-1 precursor miRNA
Gene family
MIPF0001421; mir-1732

Literature search
1 open access papers mention gga-mir-1732-1
(1 sentences)

Sequence

1 reads, 0 reads per million, 1 experiments
gccaggagcagauguguacaccgcaguccgacagcagcgcucgcgucugccugugcgCACCGUGCUGCUGUCGGGCUGcccuguucuguguacauaccggc
(((.((......(((((((((.((((((((((((((((((..((((........))))...))))))))))))))))))........))))))))))))))

Structure
   a  agcaga         -------c                  -uc    cug 
gcc gg      uguguacac        gcaguccgacagcagcgc   gcgu   c
||| ||      |||||||||        ||||||||||||||||||   ||||    
cgg cc      auacaugug        cGUCGGGCUGUCGUCGUG   Cgcg   c
   -  ------         ucuugucc                  CCA    ugu 


Annotation confidence Not enough data
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Genome context
chr2: 32706292-32706392 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from gga-mir-1732-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gga-miR-1732

Accession MIMAT0007634
Description Gallus gallus gga-miR-1732 mature miRNA
Sequence 58 - CACCGUGCUGCUGUCGGGCUG - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964