miRBase entry: gga-mir-1709

Stem-loop gga-mir-1709


Accession
MI0007446
Description
Gallus gallus gga-mir-1709 precursor miRNA

Literature search
1 open access papers mention gga-mir-1709
(7 sentences)

Sequence

10 reads, 1 reads per million, 4 experiments
cuaggcUGGAAUGAUGAGUGCACUGACUggccaucuggugcucauggcagguuggucaguugucuguuaucucucaaaaugg
........((..(((((..(.((.(((((((((((((.(......).)))).))))))))))))..)))))..)).......

Structure
cuaggcUG  AU     GU C  U         -    g gc 
        GA  GAUGA  G AC GACUggcca ucug u  u
        ||  |||||  | || ||||||||| |||| |   
        cu  cuauu  c ug uugacuggu ggac g  c
-gguaaaa  cu     gu -  -         u    g ua 


Annotation confidence Not enough data
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Genome context
chr1: 180999373-180999454 [+]

Database links

Mature gga-miR-1709

Accession MIMAT0007604
Description Gallus gallus gga-miR-1709 mature miRNA
Sequence 7 - UGGAAUGAUGAGUGCACUGACU - 28
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964