miRBase entry: gga-mir-1686

Stem-loop gga-mir-1686


Accession
MI0007420
Description
Gallus gallus gga-mir-1686 precursor miRNA


Sequence

agcucugagacuaucccuggggcugaccuggcacuccaggguuguagcuguuguuaccUGGAGGCUGUGCGUCAUCCCCAuggaggucaggauggguu
.((((...((((.(((.(((((.(((((((((.(((((((....((((....))))))))))))))).).)))).))))).))))))).....)))).

Structure
a    --uga    a   c     c    - -    a       guug    u 
 gcuc     gacu ucc ugggg ugac c uggc cuccagg    uagc g
 ||||     |||| ||| ||||| |||| | |||| |||||||    ||||  
 uggg     cugg agg ACCCC ACUG G GUCG GAGGUcc    auug u
u    uagga    -   u     U    C U    -       ----    u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr3: 75850124-75850221 [-]

Database links

Mature gga-miR-1686

Accession MIMAT0007575
Description Gallus gallus gga-miR-1686 mature miRNA
Sequence 59 - UGGAGGCUGUGCGUCAUCCCCA - 80
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964