Stem-loop gga-mir-1683

Accession

MI0007417

Description

Gallus gallus gga-mir-1683 precursor miRNA

Literature search

1 open access papers mention gga-mir-1683
(1 sentences)

Sequence

2 reads, 1 reads per million, 2 experiments

gcugugccaggcuccacuggcaagaugcuuuuugucaccuggaugugagauggucaguUCUGGGACAGUCACAGCAUCUUUcugguuuaugcugugucagc
((((.(((((.....(((((.((((((((..(((((.((.(((..(((.....)))..))))))))))....)))))))).))))).....))).))))))

Structure

    u  -   gcucc     c        --uu     a  u   ug   g 
gcug gc cag     acugg aagaugcu    uuguc cc gga  uga a
|||| || |||     ||||| ||||||||    ||||| || |||  ||| u
cgac ug guc     ugguc UUCUACGA    GACAG GG UCU  acu g
    -  u   guauu     U        CACU     -  -   ug   g 

Annotation confidence Not enough data

Genome context

chr1: 49924840-49924940 [-]

Mature gga-miR-1683

• Accession: MIMAT0007570
• Description: Gallus gallus gga-miR-1683 mature miRNA
• Sequence: 59 - UCUGGGACAGUCACAGCAUCUUU - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964