miRBase entry: gga-mir-1678

Stem-loop gga-mir-1678


Accession
MI0007412
Description
Gallus gallus gga-mir-1678 precursor miRNA


Sequence

5 reads, 1 reads per million, 2 experiments
aggggugcugagugacucccugcuguugucagauuggagccauaggcaauUUUGACAAAGACAGAAGGAGCUcaacacuuuacccu
(((((((.(((((..((..(((((.((((((((.....(((...)))...)))))))))).))).))..))))).)))....))))

Structure
    ----   c     ga  cc   -  g        uugga   a 
aggg    gug ugagu  cu  cug cu uugucaga     gcc  
||||    ||| |||||  ||  ||| || ||||||||     ||| u
uccc    cac acUCG  GA  GAC GA AACAGUUU     cgg  
    auuu   a     AG  -A   A  -        --uaa   a 


Annotation confidence Not enough data
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Genome context
chr12: 2538548-2538633 [-]

Database links

Mature gga-miR-1678

Accession MIMAT0007564
Description Gallus gallus gga-miR-1678 mature miRNA
Sequence 51 - UUUGACAAAGACAGAAGGAGCU - 72
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964