miRBase entry: gga-mir-1667

Stem-loop gga-mir-1667


Accession
MI0007401
Description
Gallus gallus gga-mir-1667 precursor miRNA


Sequence

194 reads, 5 reads per million, 3 experiments
gccaggagguuguaaGAGAUUCUGACACAAUGUUUAGAgauugagacagaaucUAACAUGAUGUCAGGAUUUCCCagaaccugcugc
..(((.(((((.(..((((((((((((..(((((...(((((.......))))))))))..))))))))))))..).))))).))).

Structure
gc   g     g aa            CA     UAG     ga 
  cag agguu u  GAGAUUCUGACA  AUGUU   Agauu  g
  ||| ||||| |  ||||||||||||  |||||   |||||  a
  guc uccaa a  CUUUAGGACUGU  UACAA   Ucuaa  c
-c   g     g CC            AG     ---     ga 


Annotation confidence Not enough data
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Genome context
chr24: 5291926-5292012 [-]

Database links

Mature gga-miR-1667-3p

Accession MIMAT0007550
Description Gallus gallus gga-miR-1667-3p mature miRNA
Sequence 54 - UAACAUGAUGUCAGGAUUUCCC - 75
Evidence experimental
Illumina [1-2]

Mature gga-miR-1667-5p

Accession MIMAT0026778
Description Gallus gallus gga-miR-1667-5p mature miRNA
Sequence 16 - GAGAUUCUGACACAAUGUUUAGA - 38
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45