miRBase entry: gga-mir-1652

Stem-loop gga-mir-1652


Accession
MI0007384
Description
Gallus gallus gga-mir-1652 precursor miRNA


Sequence

ggggaaggcccguggggaugcuccuacccggggcgcggggcugcuguccccaccaUCCCUGUGUCCCCUCGGUGGCAgcaggacucugccaucccc
(((((.(((....(((..((((.(((((.(((((((((((.((.((....)).)).)))))))))))...))))).))))...))).))).)))))

Structure
     a   ccgu   -ga    c     --c           c  c  u 
gggga ggc    ggg   ugcu cuacc   ggggcgcgggg ug ug c
||||| |||    |||   |||| |||||   ||||||||||| || ||  
ccccu ccg    cuc   acgA GGUGG   CCCUGUGUCCC ac ac c
     a   ---u   agg    C     CUC           U  c  c 


Annotation confidence Not enough data
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Genome context
chr18: 9720248-9720343 [-]

Database links

Mature gga-miR-1652

Accession MIMAT0007531
Description Gallus gallus gga-miR-1652 mature miRNA
Sequence 56 - UCCCUGUGUCCCCUCGGUGGCA - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964