Stem-loop gga-mir-1626

Accession

MI0007355

Description

Gallus gallus gga-mir-1626 precursor miRNA

Sequence

12 reads, 1 reads per million, 2 experiments

aguguguugaugccaUUUCCAUGGCAGACUUUCUAGGCUgaagauuucugaaaucUCUGGAAGUUGCCCUGGACGUGguauucaaugccu
((.(((((((((((((.((((.(((((.(((.((((.....((((((...)))))))))))))))))).)))).)))))).)))))))))

Structure

  u       -      U    U     A   U    GCUga      c 
ag guguuga ugccaU UCCA GGCAG CUU CUAG     agauuu  
|| ||||||| |||||| |||| ||||| ||| ||||     |||||| u
uc cguaacu augGUG AGGU CCGUU GAA GGUC     Ucuaaa  
  -       u      C    C     -   -    -----      g 

Annotation confidence Not enough data

Genome context

chr1: 5693452-5693541 [+]

Mature gga-miR-1626-5p

• Accession: MIMAT0007495
• Description: Gallus gallus gga-miR-1626-5p mature miRNA
• Sequence: 16 - UUUCCAUGGCAGACUUUCUAGGCU - 39
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1626-3p

• Accession: MIMAT0007496
• Description: Gallus gallus gga-miR-1626-3p mature miRNA
• Sequence: 56 - UCUGGAAGUUGCCCUGGACGUG - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964