miRBase entry: gga-mir-1620

Stem-loop gga-mir-1620


Accession
MI0007349
Description
Gallus gallus gga-mir-1620 precursor miRNA

Literature search
1 open access papers mention gga-mir-1620
(1 sentences)

Sequence

3 reads, 1 reads per million, 2 experiments
ugcaauaugggcuugauccaaagccuguuuaagucaguggacugauucccaaugACUUUAAUGGGCUUUGGAUCACacccuaauugca
((((((..(((..((((((((((((((((.((((((.(((........))).)))))).))))))))))))))))..)))..))))))

Structure
      au   cu                u      g   acu 
ugcaau  ggg  ugauccaaagccuguu aaguca ugg   g
||||||  |||  |||||||||||||||| |||||| |||    
acguua  ccc  ACUAGGUUUCGGGUAA UUCAgu acc   a
      au   aC                U      a   cuu 


Annotation confidence Not enough data
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Genome context
chr8: 18552909-18552996 [+]

Database links

Mature gga-miR-1620

Accession MIMAT0007487
Description Gallus gallus gga-miR-1620 mature miRNA
Sequence 55 - ACUUUAAUGGGCUUUGGAUCAC - 76
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964