miRBase entry: gga-mir-1617

Stem-loop gga-mir-1617


Accession
MI0007346
Description
Gallus gallus gga-mir-1617 precursor miRNA


Sequence

cccaacagcuagcacucagcaguucuaaggcagcugauuucuccuuguguuucAGAGGCCUUCAGAUACUGUUUUguggcuggcauggg
((((...((((((((..((((((((((((((..((((..............))))..))))).))).))))))..)).)))))).))))

Structure
    aca      -  uc      -   -     ag    uuucuc 
ccca   gcuagc ac  agcagu ucu aaggc  cuga      c
||||   |||||| ||  |||||| ||| |||||  ||||       
gggu   cggucg ug  UUGUCA AGA UUCCG  GAcu      u
    --a      g  UU      U   C     GA    uugugu 


Annotation confidence Not enough data
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Genome context
chr5: 28336052-28336140 [+]

Database links

Mature gga-miR-1617

Accession MIMAT0007484
Description Gallus gallus gga-miR-1617 mature miRNA
Sequence 54 - AGAGGCCUUCAGAUACUGUUUU - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964