miRBase entry: gga-mir-1590

Stem-loop gga-mir-1590


Accession
MI0007317
Description
Gallus gallus gga-mir-1590 precursor miRNA


Sequence

22 reads, 2 reads per million, 5 experiments
uggauggaaauagguaucuccagagaacaguuugucccacuuguuuuugacgucugucguagcaAGGGACAAAUUGCUCUCUGGAAGuacauuucucca
((((..(((((..((((.((((((((.(((((((((((..(((((..((((....)))).)))))))))))))))).)))))))).)))))))))))))

Structure
    ug     ag    c        a           ac     uu    g 
ugga  gaaau  guau uccagaga caguuuguccc  uuguu  ugac u
||||  |||||  |||| |||||||| |||||||||||  |||||  ||||  
accu  cuuua  cauG AGGUCUCU GUUAAACAGGG  Aacga  gcug c
    --     --    A        C           --     -u    u 


Annotation confidence Not enough data
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Genome context
chr6: 12431075-12431173 [-]

Database links

Mature gga-miR-1590

Accession MIMAT0007452
Description Gallus gallus gga-miR-1590 mature miRNA
Sequence 65 - AGGGACAAAUUGCUCUCUGGAAG - 87
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964