miRBase entry: gga-mir-1575

Stem-loop gga-mir-1575


Accession
MI0007301
Description
Gallus gallus gga-mir-1575 precursor miRNA


Sequence

guaggaugcgugcugugcuucguggugCUGGCAGCACGUAGGAGCAGGucaaguaguucuguccugacucuacacugagccagcccugcaaacagcucaaccac
...((.((...(((((....((.((.((((((.....(((((..((((.((........)).))))..))))).....))))))))))...))))).)).))..

Structure
gua  a  cgu     gcuu  u  u      AGCAC     AG    u  agu 
   gg ug   gcugu    cg gg gCUGGC     GUAGG  CAGG ca   a
   || ||   |||||    || || ||||||     |||||  |||| ||    
   cc ac   cgaca    gu cc cgaccg     caucu  gucc gu   g
-ca  a  --u     -aac  -  -      aguca     ca    u  cuu 


Annotation confidence Not enough data
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Genome context
chr4: 29768218-29768321 [-]

Database links

Mature gga-miR-1575

Accession MIMAT0007436
Description Gallus gallus gga-miR-1575 mature miRNA
Sequence 28 - CUGGCAGCACGUAGGAGCAGG - 48
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964