Stem-loop gga-mir-1559

Accession

MI0007284

Description

Gallus gallus gga-mir-1559 precursor miRNA

Gene family

MIPF0001031; mir-1559

Literature search

2 open access papers mention gga-mir-1559
(6 sentences)

Sequence

5359 reads, 77 reads per million, 5 experiments

uagacuccuUUCGAUGCUUGUAUGCUACUCCcaagaaugcuaacaggAGUUACAUGUAUGCAUCGAGCAgagacua
(((.(((..((((((((.((((((..(((((..............)))))..)))))).))))))))..))).)))

Structure

   a   cu        U      CU     caagaa 
uag cuc  UUCGAUGC UGUAUG  ACUCC      u
||| |||  |||||||| ||||||  |||||       
auc gag  GAGCUACG AUGUAC  UGAgg      g
   a   AC        U      AU     acaauc 

Annotation confidence Not enough data

Genome context

chr7: 1341238-1341313 [-]

Mature gga-miR-1559-5p

• Accession: MIMAT0007416
• Description: Gallus gallus gga-miR-1559-5p mature miRNA
• Sequence: 10 - UUCGAUGCUUGUAUGCUACUCC - 31
• Evidence: experimental ; Illumina [1-2]

Mature gga-miR-1559-3p

• Accession: MIMAT0026775
• Description: Gallus gallus gga-miR-1559-3p mature miRNA
• Sequence: 48 - AGUUACAUGUAUGCAUCGAGCA - 69
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45