Stem-loop gga-mir-1558

Accession

MI0007283

Description

Gallus gallus gga-mir-1558 precursor miRNA

Sequence

3 reads, 2 reads per million, 2 experiments

cgcugcuccagagcccguuauacucagcaggacaagaggggacaggcagggcugcucaCUGCUGUGAUGGGAGCUCUGggaugcg
(((...((((((((((((((....((((((.....(((.((.(......).)).))).))))))))))))..))))))))..)))

Structure

   ugc        --      uacu      gacaa   g  a ag 
cgc   uccagagc  ccguua    cagcag     gag gg c  g
|||   ||||||||  ||||||    ||||||     ||| || |   
gcg   ggGUCUCG  GGUAGU    GUCGUC     cuc uc g  c
   -ua        AG      ----      ----a   g  g ga 

Annotation confidence Not enough data

Genome context

chr20: 1000510-1000594 [-]

Mature gga-miR-1558

• Accession: MIMAT0007415
• Description: Gallus gallus gga-miR-1558 mature miRNA
• Sequence: 59 - CUGCUGUGAUGGGAGCUCUG - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964