Stem-loop sequence gma-MIR1533

Accession

MI0007253 (change log)

Description

Glycine max miR1533 stem-loop

Literature search

1 open access papers mention gma-MIR1533
(1 sentences)

Stem-loop

   uguaa      ca   -         a         cuaucaucaucaccu     acu    cca    c       uc 
5'      auuauu  uau guuauuauu uuauuguca               uuauu   auca   ucac aucauug  u
        ||||||  ||| ||||||||| |||||||||               |||||   ||||   |||| |||||||  c
3'      ugguaa  aua uaauaauaa aauaauagu               aauaa   uagu   ggug uaguaac  u
   -----      uc   g         a         ---------------     --c    acc    a       ua 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Glycine_max_v2.0; GCA_000004515.3): chr20: 47549866-47550005 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0007253

Mature sequence gma-miR1533

• Accession: MIMAT0007396
• Sequence: 112 - auaauaaaaauaauaauga - 130
• Evidence: experimental; 454 [1]

References

1. PMID:18402695 "Novel and nodulation-regulated microRNAs in soybean roots" Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O BMC Genomics. 9:160(2008).