Stem-loop sequence gma-MIR1522

Accession

MI0007237 (change log)

Description

Glycine max miR1522 stem-loop

Literature search

1 open access papers mention gma-MIR1522
(7 sentences)

Stem-loop

   uacagacaaau     gc       g       - c      cu   aaugcauaaaauaguuaauguuuuauaauuaguaugauuacccgugu 
5'            uuauu  uuaaaau aaauuaa c aacuuu  uaa                                               a
              |||||  ||||||| ||||||| | ||||||  |||                                                
3'            aauaa  aauuuua uuuaauu g uugaga  auu                                               a
   -auaaauaauu     ga       a       u a      au   aauaaaaguuagugaaauaguacuuaaucuuuuuaguguuacaaugu 

Confidence

Annotation confidence: not enough data

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Genome context

Coordinates (Glycine_max_v2.0; GCA_000004515.3)	Overlapping transcripts
chr4: 13894953-13895140 [+]	intergenic
chr4: 13918581-13918768 [+]	intergenic

Database links

• miRBase Tracker:MI0007237

Mature sequence gma-miR1522

• Accession: MIMAT0007383
• Sequence: 11 - uuuauugcuuaaaaugaaau - 30
• Evidence: experimental; 454 [1]

References

1. PMID:18402695 "Novel and nodulation-regulated microRNAs in soybean roots" Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O BMC Genomics. 9:160(2008).