Stem-loop sequence gma-MIR1518

Accession

MI0007231 (change log)

Description

Glycine max miR1518 stem-loop

Literature search

2 open access papers mention gma-MIR1518
(2 sentences)

Stem-loop

   augug     -    -    aaa          uc   acauaggucaugagaucaacauugacagauuua 
5'      caaaa ugug uugu   gugaauauca  ggc                                 c
        ||||| |||| ||||   ||||||||||  |||                                 a
3'      guuuu acac aaca   cacuuauagu  ccg                                 g
   -uaag     c    u    --c          --   auuuguaaauagcacaagagugcaguuccgacg 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Glycine_max_v2.0; GCA_000004515.3): chr9: 7525122-7525259 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0007231

Mature sequence gma-miR1518

• Accession: MIMAT0007377
• Sequence: 11 - uguguuguaaagugaauauca - 31
• Evidence: experimental; 454 [1]

References

1. PMID:18402695 "Novel and nodulation-regulated microRNAs in soybean roots" Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O BMC Genomics. 9:160(2008).