Stem-loop sequence gma-MIR1515a

Accession

MI0007228 (change log)

Previous IDs

gma-MIR1515

Description

Glycine max miR1515 stem-loop

Gene family

MIPF0001591; MIR1515

Literature search

11 open access papers mention gma-MIR1515a
(23 sentences)

Stem-loop

   u    guu              caa     u   c auuuugauucccugcaccguuauuucguuguggcau 
5'  aaau   caucauuuugcgug   ugauc gaa c                                    a
    ||||   ||||||||||||||   ||||| ||| |                                     
3'  uuua   guaguaaaacgcac   acuag cuu g                                    a
   u    acu              -uc     u   u caaaagguguuuguauuuuaguuaccgaauuaaacu 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Glycine_max_v2.0; GCA_000004515.3): chr1: 49411416-49411560 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0007228

Mature sequence gma-miR1515a

• Accession: MIMAT0007374
• Previous IDs: gma-miR1515
• Sequence: 11 - ucauuuugcgugcaaugaucug - 32
• Evidence: experimental; 454 [1]

References

1. PMID:18402695 "Novel and nodulation-regulated microRNAs in soybean roots" Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O BMC Genomics. 9:160(2008).