miRBase entry: oan-mir-1421ag-2

Stem-loop oan-mir-1421ag-2


Accession
MI0007078
Description
Ornithorhynchus anatinus oan-mir-1421ag-2 precursor miRNA
Gene family
MIPF0000564; mir-1421


Sequence

3 reads, 5 reads per million, 1 experiments
ugaguuggacacguggugcagugugauaguggaauaaGCUGCAUCACGUGUGACCUCCguacaccgug
.(((....((((((((((((((...............))))))))))))))...)))...........

Structure
----------u   uugg              gugaua 
           gag    acacguggugcagu      g
           |||    ||||||||||||||      u
           CUC    UGUGCACUACGUCG      g
gugccacaugC   -CAG              aauaag 


Annotation confidence Not enough data
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Genome context
X1: 44303617-44303684 [-]
Clustered miRNAs
12 other miRNAs are < 10 kb from oan-mir-1421ag-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oan-miR-1421ag-3p

Accession MIMAT0007298
Description Ornithorhynchus anatinus oan-miR-1421ag-3p mature miRNA
Sequence 38 - GCUGCAUCACGUGUGACCUCC - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004