Stem-loop gga-mir-1451

Accession

MI0007054

Description

Gallus gallus gga-mir-1451 precursor miRNA

Gene family

MIPF0001049; mir-1451

Literature search

1 open access papers mention gga-mir-1451
(2 sentences)

Sequence

5200 reads, 93 reads per million, 5 experiments

cagagcaagcgcaggagcugcugccUCGCACAGGAGCAAGUUACCGCguucagcucgccugcCGUAACUCGCUGCUGUGAGAGGCagcggcuccuggcucucccugcucc
..((((((((.((((((((((((((((.(((((.(((.((((((.(((...........))).)))))).))).))))).))))))))))))))))))).....))))).

Structure

ca     -----   g                G     G   A      C   uuca 
  gagca     agc caggagcugcugccUC CACAG AGC AGUUAC GCg    g
  |||||     ||| |||||||||||||||| ||||| ||| |||||| |||    c
  cucgu     ucg guccucggcgaCGGAG GUGUC UCG UCAAUG cgu    u
-c     cccuc   -                A     G   C      C   ccgc 

Annotation confidence High

Genome context

chr3: 76267732-76267841 [+]

Mature gga-miR-1451-5p

• Accession: MIMAT0007324
• Description: Gallus gallus gga-miR-1451-5p mature miRNA
• Sequence: 26 - UCGCACAGGAGCAAGUUACCGC - 47
• Evidence: experimental ; 454 [1], Illumina [2]

Mature gga-miR-1451-3p

• Accession: MIMAT0007325
• Description: Gallus gallus gga-miR-1451-3p mature miRNA
• Sequence: 63 - CGUAACUCGCUGCUGUGAGAGGC - 85
• Evidence: experimental ; 454 [1], Illumina [2]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964


2. PubMed ID: 18430245
   Deep sequencing of chicken microRNAs
   Burnside J, Ouyang M, Anderson A, Bernberg E, Lu C, Meyers BC, Green PJ, Markis M, Isaacs G, Huang E, Morgan RW
   BMC Genomics (2008) 9:185