miRBase entry: pta-MIR482c

Stem-loop pta-MIR482c


Accession
MI0007052
Description
Pinus taeda pta-MIR482c precursor miRNA
Gene family
MIPF0000403; MIR482


Sequence

aggagugggaggguaggagaaggcucuguggugaggucucagucauaaucucaucagUCUUCCCUAUUCCUCCCAUUccu
(((((((((((((((((.(((((((....((((((((..........))))))))))))))))))).)))))))))))))

Structure
             -    a       cugu        cuca 
aggagugggaggg uagg gaaggcu    ggugaggu    g
||||||||||||| |||| |||||||    ||||||||     
uccUUACCCUCCU AUCC CUUCUga    cuacucua    u
             U    -       ----        auac 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pta-miR482c

Accession MIMAT0006014
Description Pinus taeda pta-miR482c mature miRNA
Sequence 58 - UCUUCCCUAUUCCUCCCAUU - 77
Evidence not_experimental

References

  1. PubMed ID: 18363789
    Stress-responsive microRNAs in Populus
    "Lu S, Sun YH, Chiang VL"
    "Plant J (2008) 55:131-151