miRBase entry: ptc-MIR827

Stem-loop ptc-MIR827


Accession
MI0007041
Description
Populus trichocarpa ptc-MIR827 precursor miRNA

Literature search
2 open access papers mention ptc-MIR827
(9 sentences)

Sequence

caugaauauauuuguugauagucaucuagugaacauugaaagucauaUUAGAUGACCAUCAACGAAAAcauucaug
(((((((...(((((((((.(((((((((((.((.......))..))))))))))).)))))))))...)))))))

Structure
       aua         a           -a  au 
caugaau   uuuguugau gucaucuagug  ac  u
|||||||   ||||||||| |||||||||||  ||  g
guacuua   AAGCAACUA CAGUAGAUUau  ug  a
       cAA         C           ac  aa 


Annotation confidence Not enough data
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Genome context
CM000343.2: 120916-120991 [+]

Database links

Mature ptc-miR827

Accession MIMAT0006003
Description Populus trichocarpa ptc-miR827 mature miRNA
Sequence 48 - UUAGAUGACCAUCAACGAAAA - 68
Evidence experimental
cloned [1]

References

  1. PubMed ID: 18363789
    Stress-responsive microRNAs in Populus
    "Lu S, Sun YH, Chiang VL"
    "Plant J (2008) 55:131-151