miRBase entry: oan-mir-1419g

Stem-loop oan-mir-1419g


Accession
MI0007020
Description
Ornithorhynchus anatinus oan-mir-1419g precursor miRNA
Gene family
MIPF0000570; mir-1419


Sequence

1130 reads, 1119 reads per million, 4 experiments
ggugucacaugcAUUACUGAGAGAUGUCAUCACAcgcuaccucauucugUGAUGUCAUCACUCAGUACCGcacauguccacc
((((.((..(((..(((((((.((((.(((((((.............))))))).)))).)))))))..)))..))..))))

Structure
    -u  ca   AU       A    U       cgcua 
ggug  ca  ugc  UACUGAG GAUG CAUCACA     c
||||  ||  |||  ||||||| |||| |||||||     c
ccac  gu  acG  AUGACUC CUAC GUAGUgu     u
    cu  ac   CC       A    U       cuuac 


Annotation confidence High
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Genome context
Contig22847: 5741-5822 [-]
Clustered miRNAs
11 other miRNAs are < 10 kb from oan-mir-1419g
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oan-miR-1419g-5p

Accession MIMAT0007322
Description Ornithorhynchus anatinus oan-miR-1419g-5p mature miRNA
Sequence 13 - AUUACUGAGAGAUGUCAUCACA - 34
Evidence experimental
Illumina [1]

Mature oan-miR-1419g-3p

Accession MIMAT0007323
Description Ornithorhynchus anatinus oan-miR-1419g-3p mature miRNA
Sequence 50 - UGAUGUCAUCACUCAGUACCG - 70
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004