miRBase entry: oan-mir-1421am

Stem-loop oan-mir-1421am


Accession
MI0007015
Description
Ornithorhynchus anatinus oan-mir-1421am precursor miRNA
Gene family
MIPF0000564; mir-1421


Sequence

209 reads, 231 reads per million, 2 experiments
gcaAGGAGGUCGUAGGUCAUGCAGAgugauggcggaauaugcugcacugcgugcgaccucccuu
....((((((((((.((..(((((....((......))...)))))..)).))))))))))...

Structure
gcaA          G  CA     Agug  gg 
    GGAGGUCGUA GU  UGCAG    au  c
    |||||||||| ||  |||||    ||   
    ccuccagcgu cg  acguc    ua  g
-uuc          g  uc     -gua  ag 


Annotation confidence Not enough data
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Genome context
Contig7160: 23160-23223 [-]
Clustered miRNAs
9 other miRNAs are < 10 kb from oan-mir-1421am
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oan-miR-1421am

Accession MIMAT0007313
Description Ornithorhynchus anatinus oan-miR-1421am mature miRNA
Sequence 4 - AGGAGGUCGUAGGUCAUGCAGA - 25
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004