miRBase entry: oan-mir-1421g-3

Stem-loop oan-mir-1421g-3


Accession
MI0007006
Description
Ornithorhynchus anatinus oan-mir-1421g-3 precursor miRNA
Gene family
MIPF0000564; mir-1421


Sequence

4405 reads, 1993 reads per million, 4 experiments
gugugAGGGGGUCGUACGUCAUGCAGAgugauggcgggauaugcugcaccgugugcgaccuccuuaca
.(((((((((((((((((...(((((....((......))...)))))...)))))))))))))))))

Structure
g                 UCA     Agug  gg 
 ugugAGGGGGUCGUACG   UGCAG    au  c
 |||||||||||||||||   |||||    ||   
 acauuccuccagcgugu   acguc    ua  g
-                 gcc     -gua  gg 


Annotation confidence Not enough data
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Genome context
Contig7160: 10086-10153 [-]
Clustered miRNAs
20 other miRNAs are < 10 kb from oan-mir-1421g-3
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oan-miR-1421g-5p

Accession MIMAT0006975
Description Ornithorhynchus anatinus oan-miR-1421g-5p mature miRNA
Sequence 6 - AGGGGGUCGUACGUCAUGCAGA - 27
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004