miRBase entry: oan-mir-1421ah

Stem-loop oan-mir-1421ah


Accession
MI0007001
Description
Ornithorhynchus anatinus oan-mir-1421ah precursor miRNA
Gene family
MIPF0000564; mir-1421


Sequence

869 reads, 1551 reads per million, 1 experiments
gaccuaccacacggugugAGGAGGACACAUGUGGGUGCAgugugauaguagaauaugcUGCAUAAUGUGUGGCCUCCccacacuguguuguguc
....(((.((((((((((.(((((.(((((((..((((((((((.........)))))))))).))))))).))))).)))))))))).)))..

Structure
gacc   c          A     A       GG          aua 
    uac acacggugug GGAGG CACAUGU  GUGCAgugug   g
    ||| |||||||||| ||||| |||||||  ||||||||||   u
    gug ugugucacac CCUCC GUGUGUA  UACGUcguau   a
--cu   u          c     G       -A          aag 


Annotation confidence Not enough data
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Genome context
X1: 44321166-44321259 [-]
Clustered miRNAs
6 other miRNAs are < 10 kb from oan-mir-1421ah
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oan-miR-1421ah-5p

Accession MIMAT0007303
Description Ornithorhynchus anatinus oan-miR-1421ah-5p mature miRNA
Sequence 19 - AGGAGGACACAUGUGGGUGCA - 39
Evidence experimental
Illumina [1]

Mature oan-miR-1421ah-3p

Accession MIMAT0007304
Description Ornithorhynchus anatinus oan-miR-1421ah-3p mature miRNA
Sequence 59 - UGCAUAAUGUGUGGCCUCC - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004