Stem-loop oan-mir-32

Accession

MI0006952

Description

Ornithorhynchus anatinus oan-mir-32 precursor miRNA

Gene family

MIPF0000069; mir-32

Sequence

1521 reads, 37 reads per million, 5 experiments

uucccauucugcuagcucugguggagaUAUUGCACAUUACUAAGUUGcauguugucaaggccucugugCAAUUUAGUGUGUGCGAUAUUuucacaugagugcaugcaccccgguug
...((....(((..((((..(((((((((((((((((.(((((((((((((..((....))..).)))))))))))))))))))))))))))))..))))....)))....))...

Structure

uuc  auuc   --ua    ug                 U            - uu  c 
   cc    ugc    gcuc  guggagaUAUUGCACAU ACUAAGUUGcau g  gu a
   ||    |||    ||||  ||||||||||||||||| |||||||||||| |  ||  
   gg    acg    ugag  cacuuUUAUAGCGUGUG UGAUUUAACgug c  cg a
guu  cccc   uacg    ua                 -            u uc  g 

Annotation confidence High

Genome context

X3: 5770613-5770728 [-]

Mature oan-miR-32-5p

• Accession: MIMAT0007268
• Description: Ornithorhynchus anatinus oan-miR-32-5p mature miRNA
• Sequence: 28 - UAUUGCACAUUACUAAGUUG - 47
• Evidence: experimental ; Illumina [1]

Mature oan-miR-32-3p

• Accession: MIMAT0007269
• Description: Ornithorhynchus anatinus oan-miR-32-3p mature miRNA
• Sequence: 69 - CAAUUUAGUGUGUGCGAUAUU - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004